A simple CLI toolbox to use the European Nucleotide Archive (ENA)

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ena-utils is a small python package that provides a CLI to submit nucleotides sequences to the European Nucleotide Archive (ENA).

Supported submission types

  • Non-multiplexed paired-end sequencing reads

Features

  • File upload

  • Study registration

  • Experiment registration

  • Run registration

  • Sample registration

Requirements

  • Python3

  • Webin account

Supporting material